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Inorganic Pyrophosphatase: Key Enzyme for Efficient In Vitro Transcription

Oct 31, 2025

Inorganic Pyrophosphatase: Key Enzyme for Efficient In Vitro Transcription

Inorganic Pyrophosphatase (PPase) plays a crucial role in modern molecular biology and mRNA production workflows. Acting as a catalyst that hydrolyzes inorganic pyrophosphate (PPi) into two orthophosphate molecules, this enzyme drives the equilibrium of nucleotide polymerization reactions forward—ultimately enhancing yield and efficiency in in vitro transcription (IVT) systems.

What Is Inorganic Pyrophosphatase and Why It Matters

During transcription and DNA synthesis, each nucleotide addition releases a pyrophosphate molecule (PPi). If PPi accumulates, it can inhibit further polymerization by reversing the reaction equilibrium.
Inorganic Pyrophosphatase solves this problem by rapidly breaking down PPi into inorganic phosphate, maintaining the direction of the reaction and allowing enzymes like T7 RNA Polymerase to work at maximum efficiency.

This makes PPase an indispensable component of any high-performance IVT workflow—particularly in the synthesis of long or complex RNA molecules used for mRNA vaccines, therapeutics, or gene editing research.

Mechanism of Action in RNA Synthesis and Energy Recycling

In a typical in vitro transcription system, nucleotide triphosphates (NTPs) are converted into RNA, releasing pyrophosphate as a by-product.


By removing PPi, Inorganic Pyrophosphatase ensures the reaction remains thermodynamically favorable, enabling:

  • Increased RNA yield
  • Reduced reaction time
  • Enhanced reproducibility between batches

In short, PPase acts as a metabolic “cleaner” that maintains reaction kinetics optimal for efficient RNA production.

Advantages of Using High-Purity Pyrophosphatase in IVT Systems

Canvax’s Inorganic Pyrophosphatase stands out for its purity and activity.
Produced as a RUO-grade reagent under GMP-like specifications, it provides a level of consistency that allows a seamless transition from research-scale experiments to pre-clinical or manufacturing settings.

A high-purity enzyme designed to enhance the efficiency of in vitro transcription. Produced under GMP-like specifications, it ensures reliability that supports a smooth progression from research to clinical-scale mRNA manufacturing.

Key benefits include:

  • 98 % purity, validated by SDS-PAGE and activity assays
  • Optimized for IVT reactions, ensuring maximal RNA yield
  • Stable performance across varying reaction conditions
  • Traceable production, with complete CoA documentation on request
  • Competitively priced at €165.20 (50 U), ideal for scaling studies

GMP-like Quality and Batch-to-Batch Consistency

Manufactured entirely in-house at Canvax’s ISO 9001 and ISO 13485-certified facilities in Spain, this enzyme benefits from a robust quality management system, raw material traceability, and strict batch-release criteria.
Such standards ensure consistent enzymatic activity, absence of contaminants, and reproducibility—parameters critical for both R&D and manufacturing environments.

Each production batch is validated for:

  • Specific activity (U/mg protein)
  • Stability under frozen and lyophilized conditions
  • Bioburden and endotoxin control (tested ≤ 0.1 EU/µg protein)

This level of quality assurance supports laboratories aiming to standardize their IVT mRNA workflows or to qualify reagents for advanced development stages.

Applications in Research and mRNA Manufacturing

Inorganic Pyrophosphatase is an essential co-factor in a wide range of enzymatic reactions beyond IVT, such as:

  • In vitro transcription and mRNA synthesis
  • DNA replication and PCR optimization
  • Energy metabolism assays
  • Coupled enzyme systems that rely on continuous removal of PPi

For example, in high-yield T7 RNA Polymerase reactions, supplementing PPase can increase RNA output by 15–25 %, depending on the template and buffer composition.
This enhancement makes it an invaluable reagent in RNA therapeutics research, biomanufacturing scale-up, and process development pipelines.

Why Choose Canvax Inorganic Pyrophosphatase

While several suppliers offer pyrophosphatase enzymes, Canvax provides a unique combination of performance, traceability, and value:

  • European manufacturer with over 20 years of expertise in enzyme and reagent production
  • Full control over the manufacturing process, ensuring short lead times and reliable supply
  • CoA, SDS, and batch records available on demand for full transparency
  • Easy integration with other Canvax reagents such as:

Together, these reagents form a cohesive toolkit for efficient and scalable mRNA synthesis.

FAQs about Inorganic Pyrophosphatase

What is the optimal amount of PPase to add to an IVT reaction?
Typically, 0.05–0.2 U per µg of RNA template is recommended, but optimization may vary depending on the transcription system.

Can it be used in GMP production?
Although sold as RUO (Research Use Only), it is manufactured under GMP-like conditions, ensuring traceability and reproducibility suitable for early-stage process development.

How should it be stored?
Store at –20 °C. Avoid repeated freeze–thaw cycles; aliquoting is recommended for long-term stability.

Is CoA documentation provided?
Yes. A Certificate of Analysis (CoA) is available on request for each batch, confirming purity, activity, and QC parameters.

Conclusion

By ensuring continuous removal of inhibitory pyrophosphate during transcription, Inorganic Pyrophosphatase acts as a silent yet vital enabler of efficient RNA synthesis.


For researchers and manufacturers aiming to achieve consistent, high-yield IVT reactions, Canvax’s Inorganic Pyrophosphatase combines technical excellence, quality assurance, and affordability—all backed by two decades of enzymology expertise.

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